🍩 Database of Original & Non-Theoretical Uses of Topology

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  1. Fractal Dimension Estimation With Persistent Homology: A Comparative Study (2020)

    Jonathan Jaquette, Benjamin Schweinhart
    Abstract We propose that the recently defined persistent homology dimensions are a practical tool for fractal dimension estimation of point samples. We implement an algorithm to estimate the persistent homology dimension, and compare its performance to classical methods to compute the correlation and box-counting dimensions in examples of self-similar fractals, chaotic attractors, and an empirical dataset. The performance of the 0-dimensional persistent homology dimension is comparable to that of the correlation dimension, and better than box-counting.

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  2. Classification of Histopathology Slides With Persistence Homology Convolutions (2025)

    Shrunal Pothagoni, Benjamin Schweinhart
    Abstract Convolutional neural networks (CNNs) are a standard tool for computer vision tasks such as image classification. However, typical model architectures may result in the loss of topological information. In specific domains such as histopathology, topology is an important descriptor that can be used to distinguish between disease-indicating tissue by analyzing the shape characteristics of cells. Current literature suggests that reintroducing topological information using persistent homology can improve medical diagnostics; however, previous methods utilize global topological summaries which do not contain information about the locality of topological features. To address this gap, we present a novel method that generates local persistent homology-based data using a modified version of the convolution operator called Persistent Homology Convolutions. This method captures information about the locality and translation invariance of topological features. We perform a comparative study using various representations of histopathology slides and find that models trained with persistent homology convolutions outperform conventionally trained models and are less sensitive to hyperparameters. These results indicate that persistent homology convolutions extract meaningful geometric information from the histopathology slides.

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